Publications

Caputi L, Carradec Q, Eveillard D, Kirilovsky A, Pelletier E, Pierella karlusich J, Rocha Jimenez Vieira F, Villar E, Chaffron S, Malviya S, Scalco E, Acinas SG, Alberti A, Aury J-M, Benoiston A-S, Bertrand S, Biard T, Bittner L, Boccara M, Brum J, Brunet C, Busseni G, Carratalà A, Claustre H, Coelho L, Colin S, D'Aniello S, Da Silva C, Del Core M, Doré H, Gasparini S, Kokoszka F, Jamet J-L, Lejeusne C, Lepoivre C, Lescot M, Lima-Mendez G, Lombard F, Lukeš J, Maillet N, Madoui M-A, Martinez E, Mazzocchi MG, Néou M, Paz-Yepes J, Poulain J, Ramondenc S, Romagnan J-B, Roux S, Salvagio Manta D, Sanges R, Speich S, Sprovieri M, Sunagawa S, Taillander V, Tanaka A, Tirichine L, Trottier C, Uitz J, Veluchamy A, Veselá J, Vincent F, Yau S, Kandels-Lewis S, Searson S, Dimier C, Picheral M, Bork P, Boss E, De Vargas C, Follows M, Grimsley N, Guidi L, Hingamp P, Karsenti E, Sordino P, Stemmann L, Sullivan M, Tagliabue A, Zingone A, Garczarek L, D'Ortenzio F, Testor P, Not F, Ribera d'Alcalà M, Wincker P, Bowler C, Iudicone D, Acinas SG, Bork P, Boss E, De Vargas C, Follows M, Gorsky G, Grimsley N, Hingamp P, Jaillon O, Kandels-Lewis S, Karp-Boss L, Karsenti E, Krzic U, Not F, Ogata H, Pesant S, Raes J, Reynaud EG, Sardet C, Sieracki M, Speich S, Stemmann L, Sullivan M, Sunagawa S, Velayoudon D, Weissenbach J (2019) Community-Level Responses to Iron Availability in Open Ocean Planktonic Ecosystems. Global Biogeochemical Cycles 33 (3) : 391-419

Pedrotti M-L, Mazzocchi MG, Lombard F, Galgani F, Kerros M-E, Henry M, Elineau A, Petit S, Fernandez de Puelles ML, Gasparini S, Tirelli V, Jamet J-L, Gorsky G (2018) TARA Mediterranean Expedition: Assessing the Impact of Microplastics on Mediterranean Ecosystem. In: Cossa M, Di Pace E, Errico M, Gentile G, Montarsolo A, Mossotti R (eds) Proceedings of the International Conference on Microplastic Pollution in the Mediterranean Sea. Springer-Verlag, 25-29.

Reygondeau G, Guieu C., Irisson JO, Benedetti F, Ayata S-D, Gasparini S, Koubbi P (2017) Biogeochemical regions of the Mediterranean Sea: an objective multidimensional and multivariate environmental approach. Progress in Oceanography 151:138-148

Romagnan JB, Aldamman L, Gasparini S, Nival P, Aubert A, Jamet J-L, Stemmann L (2016) High frequency mesozooplankton monitoring: Can imaging systems and automated sample analysis help us describe and interpret changes in zooplankton community composition and size structure - An example from a coastal site. Journal of Marine Systems 162:18-28

Benedetti F, Gasparini S, Ayata S-D (2016) Identifying copepod functional groups from species functional traits. Journal of Plankton Research 38(1): 159–166

Crise, A. et al. (2015) A MSFD complementary approach for the assessment of pressures, knowledge and data gaps in Southern European Seas: the PERSEUS experience. Marine pollution bulletin. 95(1): 28-39

Mayzaud, P., Boutoute, M., Gasparini, S and Mousseau, L. (2014) Lipids and fatty acid composition of particulate matter in the North Atlantic: importance of spatial heterogeneity, season and community structure. Marine Biology 161:1951-1971

Mayzaud P., Boutoute M., Gasparini S. (2013) Differential response of fatty acid composition in the different lipid classes from particulate matter in a high arctic fjord (Kongsfjorden, Svalbard). Marine chemistry 151:23-34

Mayzaud P., Boutoute M., Noyon M., Narcy F., Gasparini S. (2013) Lipid and fatty acids in naturally occurring particulate matter during spring and summer in a high Arctic fjord (Kongsfjorden, Svalbard). Marine biology 160 (2):383–398

Guidi-Guilvard L.D., Gasparini S., Lemée R. (2012) The negative impact of Ostreopsis cf. ovata on phytal meiofauna from the coastal NW Mediterranean. Cryptogamie Algologie 33(2) :121-128.

Lemée R., Mangialajo, L., Cohu, S., Amzil, Z., Blanfune, A., Chomerat, N., Ganzin, N., Gasparini, S., Grossel, H., Guidi-Guilvard L.D., Hoareau, L., le Duff, F., Marro, S., Simon, N., Nezan, E., Pedrotti, M.-L., Sechet, V. Soliveres O., Thibaut, T. (2012) Interactions between scientists, managers and policy makers in the framework of the french MediOs project on Ostreopsis (2008-2010). Cryptogamie Algologie 33 (2):137-142.

Margaux Noyon, Fanny Narcy, Stéphane Gasparini and Patrick Mayzaud (2012) Ontogenic variations in fatty acid and alcohol composition of the pelagic amphipod Themisto libellula in Kongsfjorden (Svalbard). Mar Biol. 159: 805-816.

Vandromme, P., Stemmann, L., Berline, L., Gasparini, S., Mousseau, L., Prejger, F., Passafiume, O., Guarini, J.-M. and Gorsky G. (2011) Inter-annual fluctuations of zooplankton communities in the Bay of Villefranche-sur-mer from 1995 to 2005 (Northern Ligurian Sea, France). Biogeosciences 8, 3143-3158.

Alves-de-Souza, C., Cornet, C., Nowaczyk, A., Gasparini, S., Skovgaard A. and Guillou L. (2011) Blastodinium spp. Infect copepods in the ultra oligotrophic marine waters of the Mediterranean sea. Biogeosciences 8, 2125-2136.

Swadling Kerrie M., Penot Florian, Vallet Carole, Rouyer Armelle, Gasparini Stéphane, Mousseau Laure, Smith Martina, Goffart Anne, Koubbi Philippe (2011) Interannual variability of zooplankton in the Dumont d'Urville sea (139°E –146°E), east Antarctica, 2004 – 2008. Polar science 5, 118-133.

Garcia-Comas Carmen, Stemmann Lars, Ibanez Frederic, Berline Léo, Mazzocchi Maria-Grazia, Gasparini Stéphane, Picheral Marc and Gorsky Gabriel (2011) Zooplankton long-term changes in the NW Mediterranean Sea: Decadal periodicity forced by winter hydrographic conditions related to large-scale atmospheric changes? J. Mar. Sys. 87, 216–226.

MERMEX group (2011) Marine ecosystems responses to climatic and anthropogenic forcings in the Mediterranean. Progress in Oceanography 91, 97-166.

Margaux Noyon, Fanny Narcy, Stéphane Gasparini and Patrick Mayzaud (2011) Growth and lipid class composition of the Arctic pelagic amphipod Themisto libellula . Mar. Biol. 158, 883-892.

Berline L, Siokou-Frangou I, Marasovic I, Vidjak O, Fernández de Puelles ML, Mazzocchi MG, Assimakopoulou G, Zervoudaki S, Fonda Umani S, Conversi A, Garcia-Comas C, Ibanez F, Gasparini S, Stemmann L, Gorsky G. (2010) Intercomparison of six Mediterranean zooplankton time series. Progress in Oceanography (accepted)

Rombouts, I., Beaugrand, G., Ibanez, F., Gasparini, S., Chiba , S. and Legendre, L. (2010) A multivariate approach to large-scale variation in marine planktonic copepod diversity and its environmental correlates. Limnology and Oceanography 55(5), 2219-2229.

Licandro, L., Conway, D., Daly Yahia, M.N, Fernandez de Puelles, L., Gasparini, S., Hecq, J.H., Tranter, P., Kirby, R.R. (2010). A blooming jellyfish in the Northeast Atlantic and Mediterranean. Biol. Letters 6, 688-691.

Piontkovski, S.A., Umani, S.F., Olita, A., de Olazabal, A., Stemmann, L., Rubio, C.G., Gasparini, S., Mazzocchi, M.G, Siokou-Frangou, I., Zervoudaki, S., Gubanova, A., Altukhov, D. (2010) The 2003 heat wave and marine plankton communities. – ICES cooperative research report 300, 56-59.

Gorsky, G., Ohman, M.D., Picheral, M., Gasparini, S., Stemmann, L., Romagnan, J.-B., Cawood, A., Pesant, S., García-Comas, C. and Prejger F. (2010) Digital zooplankton image analysis using the ZooScan integrated system. J. Plankton Res. 32(3), 285-303.

Guidi-Guilvard, L.D., Thistle, D., Khripounoff, A. and Gasparini, S. (2009) Dynamics of benthic copepods and other meiofauna in the benthic boundary layer of the deep NW Mediterranean Sea. Mar. Ecol. Prog. Ser. 396, 181-195.

Noyon, M., Gasparini, S. and Mayzaud, P. (2009) Feeding of Themisto libellula (Amphipoda Crustacea) on natural copepods assemblages in an Arctic Fjord (Kongsfjorden, Svalbard ). Polar Biol. 32, 1559-1570.

Labat, J-Ph, Gasparini, S., Mousseau, L., Prieur, L., Boutoute, M. and Mayzaud, P. (2009) Mesoscale distribution of zooplankton biomass in the northeast Atlantic Ocean determined with an Optical Plankton Counter: relationships with environmental structures. Deep Sea Research part I 56(10), 1742-1756.

Rombouts, I., Beaugrand, G., Ibanez, F., Gasparini, S., Chiba , S. and Legendre, L. (2009) Global latitudinal variations in marine copepod diversity and environmental factors. Proc. R. Soc. B 276, 3053-3062.

Narcy, F. , Gasparini, S. , Falk-Petersen, S. and Mayzaud, P. (2009) Seasonal and individual variability of lipid reserves in Oithona similis (Cyclopoida) in an Arctic fjord. Polar Biol. 32, 233-242.

Daro M.-H., Breton E., Antajan E., Gasparini S., Rousseau V. (2008) Do Phaeocystis colony blooms affect zooplankton in the Belgian Coastal Zone? In : Current Status of Eutrophication in the Belgian Coastal Zone. Rousseau V., Lancelot C. and Cox D. (Eds.). Presses Universitaires de Bruxelles, Bruxelles, pp. 61-72

Tunin-Ley, A., Labat, J.Ph, Gasparini, S., Mousseau L. and Lemée, R. (2007) Annual cycle and diversity of species and infraspecific taxa of Ceratium Schrank (Dinophyceae) in the Ligurian Sea, NW Mediterranean. J. Phycol 43, 1149-1163

Dolan, J., Lemée, R., Gasparini, S., Mousseau, L. and Heyndrickx, C. (2006) Probing Diversity in the Plankton: Using Patterns in Tintinnids (Planktonic Marine Ciliates) to Identify Mechanisms. Hydrobiologia 555, 143-157

Tackx, M., Azémar, F., Boulêtreau, S., De Pauw, N., Bakker, K., Sautour, B., Gasparini, S. , Soetaert, K., Van Damme, S. and Meire, P.(2005) Zooplankton in the Schelde estuary, Belgium and the Netherlands . Long term trends in spring populations. Hydrobiologia 540, 275-278.

Mayzaud, P., Boutoute, M., Gasparini, S., Mousseau, L. and Lefevre, D. (2005) Respiration in marine zooplankton - the other side of the coin : CO 2 production. Limnol. Oceanogr. 50(1), 291-298.

Antajan, E. and Gasparini, S. (2004) Assessment of Cryptophyceae ingestion by copepods using alloxanthin pigment: a caution . Mar. Ecol. Prog. Ser. 274, 191-198.

Antajan, E., Gasparini, S., Daro, M.H., Tackx, M. (2004). Contribution of herbivory to the diet of Temora longicornis (Müller) in Belgian coastal waters. In : Antajan, E. (2004). Responses of calanoid copepods to changes in phytoplankton dominance in the diatoms - Phaeocystis globosa dominated Belgium coastal waters. PhD thesis, Vrij Univ. Brussel, Belgium . pp. 85-108.

Tackx, M.L.M., Herman, P.J.M., Gasparini, S., Irigoien, X., Billiones, R. and Daro M.H. (2003) Selective feeding of Eurytemora affinis (copepoda, calanoida) in temperate estuaries : model and field observations. Estuar. Coast. Shelf Sci., 56(2), 305-311.

Burdloff, D., Gasparini, S., Villate, F., Uriarte, I., Cotano, U., Sautour, B. and Etcheber, H. (2002) Egg production of the copepod Acartia bifilosa in two contrasting European estuaries in relation to seston composition. J. Exp. Mar. Biol. Ecol., 274, 1-17.

Burdloff, D., Gasparini, S., Castel, J., Etcheber, H. and Villate, F. (2000) Particulate food value and its biological implication in estuarine ecosystems : effects on Eurytemora affinis copepod. Ozeanografika, 3, 203-215.

Burdloff, D., Gasparini, S., Sautour, B., Etcheber, H. and Castel, J.(2000) Is the copepod egg production in a highly turbid estuary (the Gironde, France) a function of the biochemical composition of seston ? Aquatic Ecol., 34 (2), 165-175.

Rousseau, V., Becquevort, S., Parent, J.Y., Gasparini, S., Daro, M.H., Tackx, M. and Lancelot, C. (2000). Trophic efficiency of the planktonic food web in a coastal ecosystem dominated by Phaeocystis colonies. J. Sea Res., 43, 357-372.

Gasparini, S., Daro, M.H., Antajan, E., Tackx, M., Rousseau, V., Parent, J.Y., and Lancelot, C. (2000). Mesozooplankton grazing during the Phaeocystis globosa bloom in the Southern Bight of the North Sea. J. Sea Res., 43, 345-356.

Gasparini, S. and Audit, C. (2000). The free guanidine and polyamine pools of bivalve mollusks in relation to their ecology. Biochem. Syst. Ecol., 28 (3), 209-218.

Gasparini, S., Castel, J. and Irigoien, X. (1999). Impact of suspended particulate matter on egg production of the estuarine copepod Eurytemora affinis. J. Mar. Syst, 22, 195-205.

Ban, S., Burns, C., Castel, J., Christou, E., Escribano, R., Umani, S. F., Gasparini, S., Ruiz, F. G., Hoffmeyer, M., Ianora, A., Kang, H. K., Laabir, M., Lacoste, A., Miralto, A., Poulet, S., Ning, X., Rodriguez, V., Runge, J., Shi, J., Starr, M., Uye, S. I. and Wang Y. (1997). The paradox of the diatom-copepod interactions. Mar. Ecol. Prog. Ser., 157, 287-293.

Gasparini, S. and Castel, J. (1997). Autotrophic and heterotrophic nanoplankton in the diet of the estuarine copepods Eurytemora affinis and Acartia bifilosa. J. Plankt. Res., 19, 877-890.

Irigoien, X., Castel, J. and Gasparini, S. (1996). Gut clearance rate as predictor of food limitation situations. Application to two estuarine copepods: Acartia bifilosa and Eurytemora affinis. Mar. Ecol. Prog. Ser, 131, 159-163.

Logiciels

Gasparini, S. (2007) Plankton Identifier : Un outil pour la reconnaissance automatique des organismes planctoniques à partir d'images numeriques. http://www.obs-vlfr.fr/~gaspari/Plankton_Identifier/

Thèse

Gasparini, S. (1997) Fécondité, régime alimentaire et production des principaux copépodes planctoniques de quatre estuaires européens. Thèse Doctorat Univ. Bordeaux I. 203 pp.